Transformer-Augmented Deep Learning Ensemble for Multi-Modal Neuroimaging-Based Diagnosis of Amyotrophic Lateral Sclerosis

Authors

  • Clive Asuai Delta State Polytechnic
  • Mayor Andrew Delta State Polytechnic
  • Ayigbe Prince Arinomor Delta State Polytechnic
  • Daniel Ezekiel Ogheneochuko Delta State Polytechnic
  • Aghoghovia Agajere Joseph-Brown Delta State Polytechnic
  • Ighere Merit Delta State Polytechnic
  • Atumah Collins Delta State Polytechnic

DOI:

https://doi.org/10.62411/jcta.14661

Keywords:

Amyotrophic lateral sclerosis, Deep learning, Disease classification, Feature Fusion, Medical image analysis, Multimodal Diagnosis, Neurodegenerative diseases, Vision transformer

Abstract

Amyotrophic Lateral Sclerosis (ALS) is a progressive neurodegenerative disorder that presents significant diagnostic challenges due to its heterogeneous clinical manifestations and symptom overlap with other neurological conditions. Early and accurate diagnosis is critical for initiating timely interventions and improving patient outcomes. Traditional diagnostic approaches rely heavily on clinical expertise and manual interpretation of neuroimaging data, such as structural MRI, Diffusion Tensor Imaging (DTI), and functional MRI (fMRI), which are inherently time-consuming and prone to interobserver variability. Recent advances in Artificial Intelligence (AI) and Deep Learning (DL) have demonstrated potential for automating neuroimaging analysis, yet existing models often suffer from limited generalizability across modalities and datasets. To address these limitations, we propose a Transformer-augmented deep learning ensemble framework for automated ALS diagnosis using multi-modal neuroimaging data. The proposed architecture integrates Convolutional Neural Networks (CNNs), Recurrent Neural Networks (RNNs), and Vision Transformers (ViTs) to leverage the complementary strengths of spatial, temporal, and global contextual feature representations. An adaptive weighting-based fusion mechanism dynamically integrates modality-specific outputs, enhancing the robustness and reliability of the final diagnosis. Comprehensive preprocessing steps, including intensity normalization, motion correction, and modality-specific data augmentation, are employed to ensure cross-modality consistency. Evaluation using 5-fold cross-validation on a curated multi-modal ALS neuroimaging dataset demon-strates the superior performance of the proposed model, achieving a mean classification accuracy of 94.5% ± 0.7%, precision of 93.9% ± 0.8%, recall of 92.9% ± 0.9%, F1-score of 93.4% ± 0.7%, spec-ificity of 97.4% ± 0.6%, and AUC-ROC of 0.968 ± 0.004. These results significantly outperform baseline CNN models and highlight the potential of transformer-augmented ensembles in complex neurodiagnostic applications. This framework offers a promising tool for clinicians, supporting early and precise ALS detection and enabling more personalized and effective patient management strategies.

Author Biographies

Clive Asuai, Delta State Polytechnic

Department of Computer Science, Delta State Polytechnic, Otefe-Oghara 331101, Nigeria

Mayor Andrew, Delta State Polytechnic

Department of Statistics, Delta State Polytechnic, Otefe-Oghara 331101, Nigeria

Ayigbe Prince Arinomor, Delta State Polytechnic

Department of Computer Science, Delta State Polytechnic, Otefe-Oghara 331101, Nigeria

Daniel Ezekiel Ogheneochuko, Delta State Polytechnic

Department of Computer Science, Delta State Polytechnic, Otefe-Oghara 331101, Nigeria

Aghoghovia Agajere Joseph-Brown, Delta State Polytechnic

Department of Computer Science, Delta State Polytechnic, Otefe-Oghara 331101, Nigeria

Ighere Merit, Delta State Polytechnic

Department of Computer Science, Delta State Polytechnic, Otefe-Oghara 331101, Nigeria

Atumah Collins, Delta State Polytechnic

Department of Mechanical Engineering, Delta State Polytechnic, Otefe-Oghara 331101, Nigeria

References

Institute of Medicine, Board on Population Health and Public Health Practice, and Committee on the Review of the Scientific Literature on Amyotrophic Lateral Sclerosis in Veterans, Amyotrophic Lateral Sclerosis in Veterans. Washington, D.C.: National Academies Press, 2006. doi: 10.17226/11757.

R. Kushol et al., “SF2Former: Amyotrophic lateral sclerosis identification from multi-center MRI data using spatial and frequency fusion transformer,” Comput. Med. Imaging Graph., vol. 108, p. 102279, Sep. 2023, doi: 10.1016/j.compmedimag.2023.102279.

H. Qin et al., “Optimizing deep learning models to combat amyotrophic lateral sclerosis (ALS) disease progression,” Digit. Heal., vol. 11, May 2025, doi: 10.1177/20552076251349719.

Enifome, Oboro and A. Maureen, “A Pilot Study of Automated Predictive Models for Retinal Diseases,” Int. J. Innov. Sci. Res. Technol., pp. 423–430, Aug. 2025, doi: 10.38124/ijisrt/25aug280.

O. Jaiyeoba, O. Jaiyeoba, E. Ogbuju, and F. Oladipo, “AI-Based Detection Techniques for Skin Diseases: A Review of Recent Methods, Datasets, Metrics, and Challenges,” J. Futur. Artif. Intell. Technol., vol. 1, no. 3, pp. 318–336, Dec. 2024, doi: 10.62411/faith.3048-3719-46.

K. B. Jillahi and A. Iorliam, “A Scoping Literature Review of Artificial Intelligence in Epidemiology: Uses, Applications, Challenges and Future Trends,” J. Comput. Theor. Appl., vol. 1, no. 4, pp. 421–445, Apr. 2024, doi: 10.62411/jcta.10350.

M. Al-Duais et al., “Comparative Analysis of Machine Learning and Deep learning Techniques for Early Prediction of Breast Cancer,” J. Futur. Artif. Intell. Technol., vol. 2, no. 2, pp. 242–254, Jun. 2025, doi: 10.62411/faith.3048-3719-68.

Clive Asuai, Collins Tobore Atumah, and Aghoghovia Agajere Joseph-Brown, “An Improved Framework for Predictive Maintenance in Industry 4.0 And 5.0 Using Synthetic Iot Sensor Data and Boosting Regressor For Oil and Gas Operations.,” Int. J. Latest Technol. Eng. Manag. Appl. Sci., vol. 14, no. 4, pp. 383–395, May 2025, doi: 10.51583/IJLTEMAS.2025.140400041.

C. Asuai et al., “Enhancing DDoS Detection via 3ConFA Feature Fusion and 1D Convolutional Neural Networks,” J. Futur. Artif. Intell. Technol., vol. 2, no. 1, pp. 145–162, Jun. 2025, doi: 10.62411/faith.3048-3719-105.

A. Clive, O. K. Nana, and I. E. Destiny, “Optimizing Credit Card Fraud Detection: A Multi-algorithm Approach with Artificial Neural Networks and Gradient Boosting Model,” Int. Res. J. Mod. Eng. Technol. Sci., vol. 6, no. 12, pp. 2582–5208, 2024.

M. Mamalakis et al., “DenResCov-19: A deep transfer learning network for robust automatic classification of COVID-19, pneumonia, and tuberculosis from X-rays,” Comput. Med. Imaging Graph., vol. 94, p. 102008, Dec. 2021, doi: 10.1016/j.compmedimag.2021.102008.

H. R. Roth et al., “Rapid artificial intelligence solutions in a pandemic—The COVID-19-20 Lung CT Lesion Segmentation Challenge,” Med. Image Anal., vol. 82, p. 102605, Nov. 2022, doi: 10.1016/j.media.2022.102605.

S. Fanijo, “AI4CRC: A Deep Learning Approach Towards Preventing Colorectal Cancer,” J. Futur. Artif. Intell. Technol., vol. 1, no. 2, pp. 143–159, Sep. 2024, doi: 10.62411/faith.2024-28.

M. M. El Mendili, G. Querin, P. Bede, and P.-F. Pradat, “Spinal Cord Imaging in Amyotrophic Lateral Sclerosis: Historical Concepts—Novel Techniques,” Front. Neurol., vol. 10, Apr. 2019, doi: 10.3389/fneur.2019.00350.

F. Agosta, E. G. Spinelli, and M. Filippi, “Neuroimaging in amyotrophic lateral sclerosis: current and emerging uses,” Expert Rev. Neurother., vol. 18, no. 5, pp. 395–406, May 2018, doi: 10.1080/14737175.2018.1463160.

G. Mårtensson et al., “The reliability of a deep learning model in clinical out-of-distribution MRI data: A multicohort study,” Med. Image Anal., vol. 66, p. 101714, Dec. 2020, doi: 10.1016/j.media.2020.101714.

A. Radhakrishnan et al., “A Cross-Modal Autoencoder Framework Learns Holistic Representations of Cardiovascular State,” bioRxiv. May 28, 2022. doi: 10.1101/2022.05.26.493497.

S. Nazir, D. M. Dickson, and M. U. Akram, “Survey of explainable artificial intelligence techniques for biomedical imaging with deep neural networks,” Comput. Biol. Med., vol. 156, p. 106668, Apr. 2023, doi: 10.1016/j.compbiomed.2023.106668.

S. N. Okofu et al., “Pilot Study on Consumer Preference, Intentions and Trust on Purchasing-Pattern for Online Virtual Shops,” Int. J. Adv. Comput. Sci. Appl., vol. 15, no. 7, pp. 804–811, 2024, doi: 10.14569/IJACSA.2024.0150780.

M. N. E. Farandi, A. K. Muda, S. Winarno, and H. Basiron, “Comparative Study of Deep Learning Models for MRI-based Brain Tumor Classification,” J. Futur. Artif. Intell. Technol., vol. 2, no. 3, pp. 370–387, Sep. 2025, doi: 10.62411/faith.3048-3719-257.

J. B. Oluwagbemi, A. E. Mesioye, and R. S. Akinbo, “Depress-HybridNet: A Linguistic-Behavioral Hybrid Framework for Early and Accurate Depression Detection on Social Media,” J. Futur. Artif. Intell. Technol., vol. 2, no. 3, pp. 432–444, Sep. 2025, doi: 10.62411/faith.3048-3719-266.

S. N. Okofu, M. I. Akazue, A. E. Oweimieotu, R. E. Ako, A. A. Ojugo, and C. E. Asuai, “Improving Customer Trust through Fraud Prevention E-Commerce Model,” J. Comput. Sci. Technoloogy, vol. 1, no. 1, pp. 76–86, 2024.

K. Kumar and N. B. Agarwal, “Hybrid Quantum-based Machine Learning Algorithm for ALS Detection using EMG Signals,” in Innovations in Electrical and Electronics Engineering (ICEEE 2024), 2024.

H. Nikafshan Rad et al., “Amyotrophic lateral sclerosis diagnosis using machine learning and multi-omic data integration,” Heliyon, vol. 10, no. 20, p. e38583, Oct. 2024, doi: 10.1016/j.heliyon.2024.e38583.

M. A. Hashjin and S. Razzagzadeh, “A deep learning framework for classification of multiple sclerosis brain scans: Achievements and challenges,” in 3rd Nat. Conf. Soft Comput. Cogn. Sci., 2025.

M. I. Akazue, I. A. Debekeme, A. E. Edje, C. Asuai, and U. J. Osame, “UNMASKING FRAUDSTERS: Ensemble Features Selection to Enhance Random Forest Fraud Detection,” J. Comput. Theor. Appl., vol. 1, no. 2, pp. 201–211, Dec. 2023, doi: 10.33633/jcta.v1i2.9462.

A. Clive and G. Gideon, “Enhanced Brain Tumor Image Classification Using Convolutional Neural Network With Attention Mechanism,” Int. J. Trend Res. Dev., vol. 10, no. 6, pp. 178–182, 2023.

M. Akazue, K. Esiri, and A. Clive, “Application of RFM model on customer segmentation in digital marketing,” Niger. J. Sci. Environ., vol. 22, no. 1, pp. 57–67, Apr. 2024, doi: 10.61448/njse221245.

M. N. Aisy, S. A. Wulandari, and D. R. I. M. Setiadi, “A Probabilistic Feature-Augmented GRU-Attention Model for Chronic Disease Prediction on Imbalanced Data,” J. Futur. Artif. Intell. Technol., vol. 2, no. 2, pp. 282–293, Jul. 2025, doi: 10.62411/faith.3048-3719-100.

C. Asuai, A. Arinomor, C. Atumah, I. Kowhoro, and D. Ogheneochuko, “Hybrid CNN-LSTM Architectures for Deepfake Audio Detection Using Mel Frequency Cepstral Coefficients and Spectogram Analysis,” Am. J. Math. Comput. Model., vol. 10, no. 3, pp. 98–109, Sep. 2025, doi: 10.11648/j.ajmcm.20251003.12.

Downloads

Published

2025-10-13

How to Cite

Asuai, C., Andrew, M., Arinomor, A. P., Ogheneochuko, D. E., Joseph-Brown, A. A., Merit, I., & Collins, A. (2025). Transformer-Augmented Deep Learning Ensemble for Multi-Modal Neuroimaging-Based Diagnosis of Amyotrophic Lateral Sclerosis. Journal of Computing Theories and Applications, 3(2), 190–205. https://doi.org/10.62411/jcta.14661